Institute of Biophysics, Academy of Sciences of the Czech Republic,
Brno, Czech Republic (K.N., J.K., O.V., O.N., V.B.); and Department of
Chemistry, University of Edinburgh, Edinburgh, United Kingdom (A.H.,
B.W., P.J.S.)
Mechanistic studies are presented of a novel class of
aminophosphine platinum(II) complexes as potential anticancer
agents. These new agents, which have demonstrated activity against
murine and human tumor cells including those resistant to cisplatin are cis-[PtCl2(Me2N(CH2)3PPh2-P)2]
(Com1) and
cis-[PtCl(C6H11NH(CH2)2PPh2-N,P)(C6H11NH(CH2)2PPh2-P)] (Com2).
We studied modifications of natural and synthetic DNAs in cell-free
media by Com1 and Com2 by various biomedical and biophysical methods
and compared the results with those obtained when DNA was modified by
cisplatin. The results indicated that Com1 and Com2 coordinated to DNA
faster than cisplatin. Bifunctional Com1 formed DNA adducts
coordinating to single adenine or guanine residues or by forming
cross-links between these residues. In comparison with cisplatin, Com1
formed the adducts more frequently at adenine residues and also formed
fewer bidentate lesions. The monofunctional Com2 only formed DNA
monodentate adducts at guanine residues. In addition, Com1 terminated
DNA synthesis in vitro more efficiently than cisplatin whereas Com2
blocked DNA synthesis only slightly. DNA unwinding studies,
measurements of circular dichroism spectra, immunochemical analysis,
and studies of the B-Z transition in DNA revealed conformational
alterations induced by the adducts of Com1, which were distinctly
different from those induced by cisplatin. Com2 had little influence on
DNA conformation. It is suggested that the activity profile of
aminophosphine platinum(II) complexes, which is different from that of
cisplatin and related analogs, might be associated with the specific
DNA binding properties of this new class of platinum(II) compounds.
 |
Introduction |
Current
platinum-based drugs are limited in their use by their severe side
effects, narrow spectrum of anticancer activity, and problems due to
drug resistance. We are investigating the design of novel platinum(II)
aminophosphine complexes as potential anticancer agents.
The aminophosphine complexes of platinum(II),
cis-[PtCl2(Me2N(CH2)3PPh2-P)2]
(Com1) and
cis-[PtCl(C6H11NH(CH2)2PPh2-N,P)(C6H11NH(CH2)2PPh2-P)] (Com2; Fig. 1) contain the possibility of
cis amine ligands, which are a feature found in many active
platinum anticancer agents (Reedijk, 1996
), together with
cis phosphine ligands. Certain diphosphines have also been
shown to exhibit anticancer activity, especially 1,2-diphenylphosphine
(dppe) complexes of Cu(I), Ag(I), and Au(I) (Berners-Price and Sadler,
1988
). Furthermore, lipophilic cations such as
[Au(dppe)]+ can disrupt the mitochondrial
membrane potentials (Berners-Price et al., 1997
), and thereby act via a
different mode of action to platinum am(m)ine antitumor complexes for
which DNA is the target (Johnson et al., 1989
).

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Fig. 1.
Structures of bis(aminophosphine) platinum(II)
complexes: 1, cis-[PtCl2(Me2N(CH2)3PPh2-P)2],
2, cis-[PtCl(C6H11NH(CH2)2PPh2-N,
P)(C6H11NH(CH2)2PPh2-P)],
3, cis-[PtCl(Me2N(CH2)2PPh2-N,
P)(Me2N(CH2)2PPh2-P)].
|
|
Metal aminophosphine complexes have been shown to be cytotoxic toward
cancer cells with a potency approaching that of
cis-diamminedichloroplatinum(II) {cis-[PtCl2(NH3)2]}
(cisplatin) and, moreover, are active against some cisplatin-resistant
cell lines (Habtemariam and Sadler, 1996
; Papathanasiou et al., 1997
).
These complexes can exist in chelate ring-opened and ring-closed forms
in aqueous solution (Fig. 2). The
equilibrium can be controlled under conditions of biological relevance
by variation of pH and chloride concentration (Habtemariam and Sadler,
1996
). The ring-closed form (Fig. 2A), being a lipophilic cation, could
thus act as an antimitochondrial agent and the ring-opened forms (Fig.
2, B and C), which contain labile chloride ligands, offer potential
binding sites to DNA.

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Fig. 2.
Schematic representation of chelate ring opening in
bis(aminophosphine) platinum(II) complexes.
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|
Recently we have shown that chelate ring-opening platinum(II)
aminophosphine complexes can bind rapidly and reversibly to the DNA
bases guanine (Habtemariam and Sadler, 1996
) and thymine as well
as to the RNA base uracil (Margiotta et al., 1997
), under physiologically relevant conditions, in contrast to platinum am(m)ine anticancer complexes (Reedijk, 1996
). The binding was observed to the
bases contained in monomeric nucleotides or in a short oligonucleotide
duplex [8 base pairs (bp)]. In this work the modification of
natural DNA and synthetic single- or double-stranded
polydeoxyribonucleotides in cell-free media was studied by using
various biomedical and biophysical methods. Com1 was chosen for these
studies as a representative of the bifunctional aminophosphine
complexes with leaving chloride ligands in cis
position to compare its effects on double-helical DNA with those of
cisplatin, whereas Com2, which has one chloride-leaving group, was used
as a model.
 |
Experimental Procedures |
Materials.
Cisplatin and
chlorodiethylenetriamineplatinum(II) chloride
{[PtCl(H2NCH2CH2NHCH2CH2NH2)]Cl}
([PtCl(dien)]Cl) were synthesized and characterized in
Lachema (Brno, Czech Republic). Com1 and Com2 (Fig. 1) were
prepared and characterized as reported elsewhere (A.H., R. Palmer, P. Potter, and P.J.S., submitted). Calf thymus (CT) DNA (42% guanine + cytosine, mean molecular mass ca. 2 × 107) was prepared and characterized as
described previously (Brabec and Pale
ek, 1970
). Denatured CT DNA
was prepared by heating at 100°C for 10 min and subsequent rapid
cooling on an ice bath. Plasmids pSP73 (2464 bp) or pSP73KB (2455 bp)
were isolated according to standard procedures and banded twice in
CsCl/ethidium bromide (EtBr) equilibrium density gradients. Synthetic
single-stranded homopolydeoxyribonucleotides poly(dA), poly(dC),
poly(dG), poly(dT), and double-helical alternating
polydeoxyribonucleotides poly(dA-dT) and poly(dG-dC) were purchased
from Boehringer-Mannheim Biochemica (Mannheim, Germany) [all
references in the text to poly(dA-dT) and poly(dG-dC) refer to duplex
molecules] (the concentrations of synthetic polynucleotides are
related to their phosphorus content). The oligodeoxyribonucleotide
duplex containing 40 bp, 5'-CCCGGATTATACGGCTTAAACCAAATTGCTTAAATTGGCC)/5'-GGCCAATTTAAGCAATTTGGTTTAAGCCGTATAATCCGGG was obtained from East Port (Prague, Czech Republic); the
single-stranded oligonucleotides constituting this duplex were purified
by strong anion exchange chromatography (Pharmacia MonoQ column) on a
Pharmacia fast protein liquid chromatography system with 10 mM
NaOH, 0.2 to 0.8 M NaCl gradient. The duplex was formed by heating the
mixture of the complementary single-stranded oligonucleotides at equal concentrations (related to the mononucleotide content) at 90°C for 5 min followed by incubation at 25°C for 4 h. Restriction endonucleases and Thermal Cycle Dideoxy DNA Sequencing Kit with VentR(exo-) or
VentR(exo+) DNA polymerases
were purchased from New England Biolabs (Beverly, MA). A primer
5'-d(GATTTAGGTGACACTATAG) was obtained from BioVendor (Brno, Czech
Republic). T4 polynucleotide kinase and Klenow fragment of DNA
polymerase I were also obtained from Boehringer-Mannheim Biochemica
(Mannheim, Germany). DNase I from bovine pancreas, nuclease P1 from
Penicillium citrinum, and alkaline phosphatase from calf
intestine were purchased from Sigma-Aldrich (Prague, Czech
Republic). EtBr, acrylamide, (bis)acrylamide, urea, and agarose were
obtained from Merck KgaA (Darmstadt, Germany). The radioactive products
were purchased from Amersham (Arlington Heights, IL).
Platination Reactions.
DNAs were modified by platinum
complexes in 10 mM NaClO4 (pH 7.0) at 37°C in
the dark for 48 h unless stated otherwise. In these samples, the
number of the molecules of the platinum complex fixed per nucleotide
residue (rb) was determined by flameless atomic
absorption spectrophotometry (FAAS) or by differential pulse
polarography (DPP; Kim et al., 1990
).
HPLC Analyses.
These analyses were performed using a Hitachi
Series 4 liquid chromatograph equipped with a LCI-100 computing
integrator and a Waters µBondapack C18 column. If not stated
otherwise, the products were separated by reversed phase (RP)-HPLC
(isocratic elution with 0.1 M ammonium acetate, pH 5.0 in 4%
CH3CN at 1 ml/min flow rate). The following
enzymatic digestion protocol was used to characterize the platinated
deoxyribooligonucleotides. The samples (50 µg of the oligonucleotide)
were incubated with 72 U DNase I at 37°C. After 4 h nuclease P1
(40 µg) was added, and the reaction was allowed to continue at 37°C
for 18 h. Finally, alkaline phosphatase (39 U) was added and the
incubation continued for additional 4 h at 37°C. The digested
samples containing constituent nucleosides were then heated for 2 min
at 80°C, centrifuged, and the supernatant was analyzed by RP-HPLC.
Each analysis was performed four times and the data varied on
average ± 1% from their mean.
Sequence Specificity of DNA Adducts.
The
(HpaI/NdeI) restriction fragment of pSP73KB DNA
(212 bp) was obtained as described previously (Brabec and Leng, 1993
). Ten micrograms of pSP73KB were treated with NdeI to obtain
linear plasmid followed by treatment with alkaline phosphatase. The
linear fragment was then 5'-end labeled by treatment with T4
polynucleotide kinase in the presence of
[32P]
-ATP. The 212-bp fragment was obtained
by subsequent treatment with HpaI and isolated by
electrophoresis through a preparative 1% agarose gel. The modification
of this fragment by cisplatin, Com1, or Com2 was carried out in 10 mM
NaClO4 (pH 7) for 48 h at 37°C to obtain
rb = 0.01. CircumVent Thermal Cycle Dideoxy DNA
Sequencing Kit with
VentR(exo-) or
(exo+) DNA polymerases was used with the protocol
for thermal cycle DNA sequencing with 5' end-labeled primer recommended
by the manufacturer with small modifications (Nováková et
al., 1995
).
EtBr Fluorescence.
These measurements were performed with
the aid of a Shimadzu RF 40 spectrofluorophotometer using a 1-cm quartz
cell. Fluorescence measurements of DNA modified by platinum in the
presence of EtBr were performed using the excitation wavelength of 546 nm and the emitted fluorescence was measured at 590 nm. The
fluorescence was measured at 25°C in 0.4 M NaCl to avoid the second
fixation site of EtBr to DNA (Butour and Macquet, 1977
). The
concentrations were 0.01 mg/ml for DNA and 0.04 mg/ml for EtBr, which
corresponded to the saturation of all intercalation sites of EtBr in
DNA (Butour and Macquet, 1977
).
Unwinding of Negatively Supercoiled DNA.
Unwinding of closed
circular supercoiled pSP73 plasmid DNA was assayed by an agarose gel
mobility shift assay (Keck and Lippard, 1992
). The unwinding angle
,
induced per platinum-DNA adduct was calculated upon the determination
of the rb value at which the complete
transformation of the supercoiled to relaxed form of the plasmid was
attained. Samples of pSP73 plasmid were incubated with Com1 or Com2 in
10 mM NaClO4, pH 7.0 at 37°C in the dark for
48 h. All samples were precipitated by ethanol and redissolved in
TAE or the TBE buffer (0.04 M Tris-acetate + 1 mM EDTA, pH 7.0 or 0.09 M Tris-borate + 1 mM EDTA, pH 9.0, respectively). An aliquot of the
precipitated sample was subjected to electrophoresis on 1% agarose
gels running at 25°C in the dark with TAE or TBE buffer with voltage
set at 30 V. The gels were then stained with EtBr, followed by
photography on Polaroid 667 film with transilluminator. The other
aliquot was used for the determination of rb
values by FAAS.
Interstrand Cross-Link (ICL) Assay.
If not stated otherwise,
Com1 or Com2 at varying concentrations were incubated with 2 µg of
pSP73 DNA linearized by EcoRI. The platinated samples were
precipitated by ethanol and analyzed for DNA ICLs in the same way as
described in several recent papers (Farrell et al., 1990
; Brabec and
Leng, 1993
). The linear duplexes were first 3'-end labeled by means of
Klenow fragment of DNA polymerase I and
[
-32P]dATP. The samples were deproteinized
by phenol, precipitated by ethanol, and the pellet was dissolved in 18 µl of a solution containing 30 mM NaOH, 1 mM EDTA, 6.6% sucrose, and
0.04% bromophenol blue. The number of ICLs was analyzed by
electrophoresis under denaturing conditions on alkaline agarose gel
(1%). After the electrophoresis was completed, the intensities of the
bands corresponding to single strands of DNA and ICL duplex were
quantified by means of a Molecular Dynamics PhosphorImager (Storm 860 System with ImageQuant software; Sunnyvale, CA). As shown below, some
platinated DNA samples were also analyzed for the ICLs using milder
conditions, when the DNA samples were treated with formamide or
dimethyl sulfoxide at 40 or 55°C and then analyzed in native agarose
gel. The details of these milder assays can be found in the papers
previously published (Konopa, 1983
; Cullinane and Phillips, 1994
).
Circular Dichroism (CD).
If not stated otherwise, CD spectra
of DNA modified by the platinum complexes were recorded at 25°C in 10 mM NaClO4 (pH 7.0) on a JASCO spectropolarimeter,
Model J720 (Tokyo, Japan).
Immunochemical Analysis.
Polyclonal antibodies that bind
selectively to adducts formed on linear double-helical DNA by cisplatin
at rb = 0.08 (Abcis) were elicited against double-helical calf-thymus DNA modified by
cisplatin at rb = 0.08 in 10 mM
NaClO4 for 48 h at 37°C. They were
purified and characterized as described in previously published papers
(Sundquist et al., 1987
; Vrána et al., 1992
). The procedures for
their immunoenzymatic analysis and enzyme-linked immunosorbent assay have been also described (Sundquist et al., 1987
;
Vrána et al., 1992
).
 |
Results and Discussion |
DNA Binding.
Solutions of double-helical CT DNA at a
concentration of 32 µg/ml were incubated with Com1 or Com2 at the
molar ratio of free platinum complex to nucleotide-phosphates at the
onset of incubation with DNA (ri) values of 0.08 in 10 mM NaClO4 (pH 7.0) at 37°C. At various
time intervals an aliquot of the reaction mixture was withdrawn and
assayed by DPP for the amount of platinum bound to DNA
(rb) (Kim et al., 1990
). Figure
3 shows a plot of
rb against the time of DNA incubation with Com1
or Com2. The amount of platinum coordinated to DNA increased with time.
After 48 h, approximately 100% or 80% of the complex Com1 or
Com2, respectively, present in the reaction mixtures was coordinated to
DNA [exhaustive dialysis of the samples of DNA treated with Com1 or
Com2 against platinum-free background solution (10 mM
NaClO4) did not affect the amount of the platinum
bound to DNA]. In these binding reactions, the time at which the
binding reached 50% (T50%) was ca. 3 h for both Com1 and Com2. The value of
T50% for the reaction of cisplatin or
monofunctional [PtCl(dien)]Cl with DNA under conditions identical
with those specified in Fig. 3 were ~4 h, respectively (Bancroft et
al., 1990
). This comparison indicates that the presence of the
aminophosphine groups as nonleaving ligands enhances the rate of the
coordination of monofunctional chloro or bifunctional dichloro
platinum(II) complexes to natural double-helical DNA. When the same
binding experiment was carried out with thermally denatured CT DNA, the
binding of Com2 remained unchanged whereas the binding of Com1 was
somewhat faster (T50% was ~2 h; Table
1).

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Fig. 3.
Formation of DNA adducts by bis(aminophosphine)
platinum(II) complexes as a function of incubation time. CT DNA at the
concentration of 32 µg/ml was mixed with Com1 ( ) or Com2 ( ) at
ri = 0.08 in 10 mM NaClO4 and at 37°C in
the dark. At various time intervals the aliquots were withdrawn and
platinum coordinated to DNA was estimated by DPP assay. Data points
measured in triplicate varied on average ± 2% from their mean.
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We also studied the binding of Com1 and Com2 to several synthetic
single-stranded homopolydeoxyribonucleotides and double-helical synthetic alternating polydeoxyribonucleotide complexes (Table 1). The
polynucleotides at a concentration of 1 × 10
4 M (the concentration is the
mononucleotide content) were incubated with Com1 or Com2 at
ri = 0.08 in 10 mM NaClO4
(pH 7.0) at 37°C. The binding of the platinum compounds was
quantified in the same way as described above for the reaction of Com1
and Com2 with CT DNA. Both complexes bound readily to single-stranded
poly(dA), poly(dC), and poly(dG) (the values of
T50% were about 2 h for Com1 and 6-7
h for Com2; Table 1). Importantly, at pH 7 Com1 did not bind to
single-stranded poly(dT) whereas Com2 was bound to poly(dT), but
considerably more slowly than to other single-stranded polynucleotides
(Table 1). Also importantly, both platinum complexes bound to
double-stranded poly(dA-dT) or poly(dG-dC) with markedly higher rates
than to single-stranded polynucleotides (Table 1). The binding of Com1
and Com2 to double-helical CT DNA and poly(dT) was also quantified in
the following way. Aliquots of the reaction withdrawn at various time
intervals were quickly cooled on an ice bath and then exhaustively
dialyzed against 10 mM NaClO4 at 4°C to remove
free (unbound) platinum compound. The content of platinum in these
samples was determined by FAAS. Results identical with those obtained
using the DPP assay were obtained. Taken together, the results of these
binding studies suggest that at pH 7 Com1 binds to adenine, cytosine,
and guanine residues in synthetic polynucleotides with approximately
the same rate, and it does not bind to thymine residues. On the other
hand, the monofunctional complex Com2 seems to bind to all base
residues in synthetic polynucleotides including thymine residues. The
binding to the latter residues is, however, noticeably slower than to other DNA base residues, and in general the DNA binding of Com2 is
slower than that of Com1. Thus, these results suggest that Com1 and
Com2 bind to different base residues in DNA and have different base
sequence preferences than their simpler analogs cisplatin or
[PtCl(dien)]Cl, which both bind preferentially to guanine residues,
and cisplatin to a less extent to adenine residues (Johnson et al.,
1982
, Fichtinger-Schepman et al., 1985
; Eastman, 1987
).
It has been shown by NMR studies that under physiological conditions
the monofunctional complex 3 (Fig. 1) binds to the mononucleotide dTMP
or thymine residues at the ends of a short (8-bp)
oligodeoxyribonucleotide duplex (Margiotta et al., 1997
). It was found
that these reactions were fast (completed within several minutes) and
that the amount of binding increased with increasing pH. Similar
results have been obtained for Com1, with binding to dTMP observed over
a large pH range (4-12). For this reason we repeated studies on the
binding of Com1 and Com2 to poly(dT) at pH 8 (the pH was adjusted by
adding a small amount of 2 M NaOH or 1 mM Tris/HCl buffer, pH 8, to 10 mM NaClO4). The binding of Com2 was affected only
negligibly whereas 30% of Com1 was now bound after 48 h (Table
1). However, when the binding of Com1 and Com2 to CT DNA was also
investigated at pH 9 (the pH was again adjusted by adding either a
small amount of 2 M NaOH or 1 mM Tris/HCl buffer, pH 9, to 10 mM
NaClO4) no binding of either complex was observed.
The amount of binding of the complexes to poly(dT) is lower than might
have been expected from the NMR work on the monomeric nucleotides. The
reason for this is unclear but it may imply that N3 atoms in poly(dT)
under these conditions are not accessible to platinum.
In addition, it was previously shown by NMR studies (Habtemariam and
Sadler, 1996
) that the addition of 0.5 M KCl led to the displacement of
coordinated 5' dGMP from
cis-[PtCl{Me2N(CH2)2PPh2-N,P}{Me2N(CH2)2PPh2-P}(5'dGMP-N7)]3+.
Therefore, we prepared a sample of CT DNA modified by Com1 or Com2 at
rb = 0.08 (at 37°C in 10 mM
NaClO4 for 48 h). The concentration of KCl
in these samples was adjusted by 5 M KCl to give a final concentration
of 0.5 M. The samples were incubated at 37°C for an additional
48 h, and the content of unbound platinum was determined by
DPP. No free platinum compound was found, indicating that the presence
of chloride ions did not result in the displacement of Com1 or Com2
from high molecular mass DNA. Therefore, it appears that the duplex
structure of DNA increases the kinetic stability of platinum
aminophosphine adducts perhaps by shielding platinum from attack by
chloride ions. Such a shielding is thought to increase the stability of
5'-G monofunctional adducts with cisplatin (Reeder et al., 1997
).
Characterization of DNA Adducts by HPLC Analysis of Enzymatically
Digested DNA.
To further characterize the coordination mode of the
two aminophosphine platinum(II) complexes, a 40-bp
deoxyribooligonucleotide duplex (with a random nucleotide sequence, see
Experimental Procedures) modified by Com1 or Com2 (in 0.1 M
NaClO4, pH 7) was enzymatically digested to
mononucleosides and analyzed by RP-HPLC. RP-HPLC analysis of enzymatic
digests of Com1- or Com2-modified oligonucleotide duplex was performed
by recording optical density at 260 nm. The profile in Fig.
4 (curve 1) shows well resolved
mononucleoside peaks that reflect the proper proportions of the single
mononucleosides in unplatinated duplex when integrated and normalized
by their extinction coefficients. Digestion of the platinated samples
(Fig. 4, curves 2 and 3) resulted in the decrease of the integrated area of the deoxyriboguanosine peak and, in the case of the digestion of the duplex modified by Com1, also in the decrease of
deoxyriboadenosine peak. The peaks of deoxyribocytidine and thymidine
were not affected. It was verified by FAAS that no product containing
platinum coeluted with the peaks corresponding to unplatinated
deoxyribonucleosides. The platinated products were not retained by the
column under the conditions used, so they could not be identified and
quantified.

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Fig. 4.
RP C18 HPLC separation of the products of enzymatic
digest of the 40-bp oligonucleotide duplex nonmodified (curve 1) or
modified by Com1 at rb = 0.09 (curve 2) or by Com2 at
rb = 0.05 (curve 3). For other details, see the
text.
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The integrated area of the deoxyriboguanosine peak decreased by ~24%
as a consequence of the platination of the duplex by the monofunctional
compound Com2 at rb = 0.05 (Fig. 4, curve 3). The
40-bp duplex used in these analyses contained 17 guanine residues. Thus, this decrease corresponds to the loss of four guanine residues due to the modification by Com2. The peaks corresponding to other nucleosides were unchanged, which implies that only guanine residues were platinated by Com2 in a monofunctional manner. Thus, the DNA
binding mode of Com2 appears to be similar to that of the other
monofunctional platinum(II) complex, [PtCl(dien)]Cl, which also binds
preferentially to guanine residues in DNA (Johnson et al., 1982
). In
other words, the presence of aminophosphine groups in the coordination
sphere of platinum in monofunctional triamineplatinum(II) complexes has
no effect on the preference of these complexes to bind to guanine
residues in double-helical DNA.
The modification of the duplex by bifunctional Com1 at
rb = 0.09 resulted in the decrease of the
integrated area of the deoxyriboguanosine and deoxyriboadenosine peaks
by ~28% and ~21%, respectively (Fig. 4, curve 2; the duplex
contained 17 guanine and 23 adenine residues). This decrease
corresponds to the loss of five guanine and five adenine residues. The
duplex was, however, modified at rb = 0.09, which
implies that each duplex only contained 7.2 adducts on the average. The
loss of ten unmodified bases due to the platination by Com1 suggests
that ca. three adducts, i.e., ca. 40% of all platinum adducts, were
bifunctional cross-links. The results of RP-HPLC analyses are
consistent with the idea that cisplatin analog Com1 preferentially
forms DNA adducts by coordinating to both a single purine or to two
purine residues.
For comparative purposes, the modification of the 40-bp duplex used in
the present study by cisplatin at rb = 0.09 was
also investigated. This modification also resulted in the decrease of
the integrated areas of the deoxyriboguanosine and deoxyriboadenosine peaks (not shown). However, in contrast to the modification by Com1,
the areas of these peaks decreased by 70% and 5%, respectively. These
decreases correspond to the loss of ~12 guanine and ~1 adenine residues, which suggests that ca. 80% of all cisplatin adducts were
bifunctional cross-links. This is in good agreement with the previous
analyses (Fichtinger-Schepman et al., 1985
; Eastman, 1987
) indicating
that cisplatin forms mainly bifunctional adducts (intrastrand
cross-links and ICLs) and that the preferential sites involved in the
adducts of cisplatin are guanine residues and, in a considerably
smaller extent, also adenine residues. Thus, the results of the present
work based on RP-HPLC analysis of enzymatically digested platinated DNA
strongly support the view that in comparison with cisplatin, Com1 forms
DNA adducts more frequently at adenine residues and also forms fewer
bifunctional lesions.
Mapping of DNA Adducts.
Recent work has shown that the in
vitro DNA synthesis by DNA polymerases on DNA templates containing
several types of bidentate adducts of platinum complexes can be
prematurely terminated at the level or in the proximity of adducts
(Comess et al., 1992
; Murray et al., 1992
; Vrána et al., 1996
).
Importantly, the efficiency of monofunctional DNA adducts of several
platinum(II) complexes to terminate DNA synthesis is considerably
smaller (Comess et al., 1992
).
DNA synthesis by VentR DNA polymerase using
HpaI/NdeI fragment of pSP73KB modified by Com1 at
rb = 0.01 in 10 mM NaClO4
(pH 7) yielded fragments corresponding to the DNA synthesis that was prematurely terminated at the level of the platinum adducts (Fig. 5A, lane 1). Thus, the adducts formed by
Com1 formed on the DNA template were capable of terminating DNA
synthesis in vitro. Several termination sites were identical with those
yielded by the adducts of cisplatin, but several termination sites were
different. Com1 terminated DNA synthesis preferentially at guanine and
adenine residues whereas cisplatin terminated DNA synthesis
preferentially at guanine residues in d(GG) and 5'-d(AG)-3' sites
(Comess et al., 1992
; Murray et al., 1992
; Vrána et al., 1996
),
the termination sites produced by Com1 were mainly at guanine and
adenine residues flanked by various base residues [CGA,
GGT, TGA, GGG, TAA,
TAT, AAC, CAG (bold and italic letters
represent the termination site)] (Fig. 5B). These results are
consistent with the results of RP-HPLC analysis of enzymatically
digested DNA modified by Com1 (Fig. 4), which suggest that the
preferential sites in DNA at which Com1 is coordinated are guanine and
adenine residues. In addition, the results of the present replication
mapping studies indicate that Com1 binds to DNA with a less regular
sequence preference, i.e., with a considerably different nucleotide
sequence specificity than cisplatin.

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Fig. 5.
A, autoradiogram of 6% polyacrylamide/8 M urea
sequencing gel showing inhibition of DNA synthesis by VentR
DNA polymerase on the HpaI/NdeI
restriction fragment of pSP73KB plasmid DNA modified by platinum
complexes. The gel contained the linear amplification products of DNA
treated with Com1, Com2, and cisplatin. Lanes: control, unmodified
template; cisDDP, DNA modified by cisplatin at rb = 0.01; 1, DNA modified by Com1 at rb = 0.01; 2, DNA
modified by Com2 at rb = 0.05; C, G, T, A,
chain-terminated marker DNAs (note that these dideoxy-sequencing lanes
give the sequence complementary to the template strand). The numbers
correspond to the nucleotide sequence numbering of 5B. B, schematic
diagram showing a portion of the sequence used to monitor inhibition of
DNA synthesis on the template containing adducts of the platinum
complexes. * indicates the 5'-end labeling of the primer. The dashed
arrow indicates the start site of the DNA polymerase and the direction
of the synthesis. , stop signals from A, lane 1. Nucleotides 1 and
18 correspond to 2539 and 1 on the pSP73KB nucleotide sequence map.
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The monofunctional compound Com2 terminated DNA synthesis only
slightly. Very faint bands were observed if the DNA template was
modified at rb values as high as 0.05 (Fig. 5A,
lane 2). This result indicates that the efficiency of DNA adducts of
Com2 to inhibit DNA synthesis in vitro is low, and similar to that
of DNA adducts of the monofunctional platinum(II) complexes such as [PtCl(dien)]Cl and
[PtCl(NH3)3]Cl.
Characterization of DNA Adducts by EtBr Fluorescence.
EtBr as
a fluorescent probe can be used to distinguish between perturbations
induced in DNA by monofunctional and bifunctional adducts of
platinum(II) compounds (Butour and Macquet, 1977
;
aludová et
al., 1997b
). Binding of EtBr to DNA by intercalation is blocked in a
stoichiometric manner by formation of the bifunctional adducts of a
series of platinum complexes including cisplatin and transplatin, which
results in a loss of fluorescence intensity (Butour and Macquet, 1977
;
ákovská et al., 1998
). On the other hand, modification of DNA by monodentate platinum(II) complexes (having only one leaving
ligand) results in only a slight decrease of EtBr fluorescence intensity as compared with nonplatinated DNA-EtBr complex.
Double-helical DNA was modified by Com1 or Com2 and for comparative
purposes also by cisplatin or [PtCl(dien)]Cl for 48 h. The
levels of the modification corresponded to the values of
rb in the range between 0 and 0.15. Modification
of DNA by all platinum complexes resulted in a decrease of EtBr
fluorescence (Fig. 6). In accordance with
the results published earlier (Butour and Macquet, 1977
;
aludová et al., 1997b
;
ákovská et al., 1998
),
cisplatin considerably decreased the fluorescence. The binding of Com1
to DNA also considerably decreased EtBr fluorescence although less than
DNA adducts of cisplatin. On the other hand, the decrease of the
fluorescence intensity by the adducts of Com2 was only very small and
similar to that induced by the adducts of [PtCl(dien)]Cl. This result
suggests that Com2 forms the DNA adducts, which resemble, from the
viewpoint of their capability to inhibit EtBr fluorescence, those
formed by monofunctional platinum complexes. Taken together, the
fluorescence analysis is consistent with the idea and supports the
postulation that the major DNA adducts of Com2 are
monofunctional lesions even after long incubations of DNA with this
platinum complex (48 h). On the other hand, under comparable conditions Com1 forms monofunctional adducts and also bifunctional cross-links on
DNA that are capable of inhibiting EtBr fluorescence. The amount of the
cross-links is, however, smaller in comparison with DNA modification by
cisplatin.

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Fig. 6.
Dependences of the EtBr fluorescence on
rb for DNA modified by various platinum complexes in 10 mM
NaClO4 at 37°C for 48 h. (+), cisplatin; ( ),
[PtCl(dien)]Cl; ( ), Com1; and ( ), Com2. Data points measured in
triplicate varied on average ± 2% from their mean.
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CD.
CD spectroscopy has already been used to obtain
information about the global changes in DNA conformation induced by
platinum complexes. It has been shown (Vrána et al., 1986
; Brabec
et al., 1990
) that the intensity of the positive CD band yielded by
B-DNA at ~275 nm is increased as a consequence of DNA modification by the complexes containing the
cis-[PtCl2(amine)2]
unit (Fig. 7, B and C); at higher levels
of the modification (rb > ~0.5) the intensity
of this CD band begins to decrease (Fig. 7, B and C). On the other
hand, the modification of DNA by clinically ineffective transplatin or
dienPt only slightly decreases this positive band (Vrána et al.,
1986
; Brabec et al., 1990
). It has been suggested (Vrána et al.,
1986
; Brabec et al., 1990
) that the enhancement of the CD band at
~275 nm due to the modification by the complexes containing
cis-[PtCl2(amine)2]
unit reflects distortions in DNA of a nondenaturational nature. The
slight reduction of this CD band induced by the binding of platinum
complexes is consistent with the occurrence of short segments
containing unpaired bases (denatured regions).

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Fig. 7.
CD spectroscopy of CT DNA modified by Com1 and
cisplatin. The spectra were recorded for DNA in 10 mM
NaClO4, pH 7.0. A, CD spectra of DNA modified by Com1.
Curves: 1, control (nonmodified) DNA; 2, rb = 0.04; 3, rb = 0.065; 4, rb = 0.09; 5, rb = 0.13; 6, rb = 0.18. B, CD
spectra of DNA modified by cisplatin. Curves: 1, control (nonmodified)
DNA; 2, rb = 0.02; 3, rb = 0.04; 4, rb = 0.065; 5, rb = 0.09; 6, rb = 0.13; 7, rb = 0.18. C,
dependence of the maximum ellipticity of the positive CD band at around
280 nm on rb. (×), cisplatin; ( ), Com1. Data points
measured in duplicate varied on average ± 1% from their mean.
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The modification of CT DNA by Com2 had only a negligible effect on the
CD spectrum (not shown). In this respect, the monofunctional Com2
resembled other platinum(II) complexes that bind to DNA monodentately {e.g., [PtCl(dien)]Cl or [PtCl(NH3)]Cl}.
In contrast, the bifunctional compound Com1 (having leaving ligands in
cis positions) radically affected the CD spectrum of DNA at
pH 7 (Fig. 7A), but in a distinctly different way than the binding of
cisplatin (Fig. 7B). As a linear function of rb,
there was a marked loss in the intensity of the positive band at around
280 nm already at low rb values (<0.05; Fig. 7,
A and C) accompanied by a loss in the intensity of the negative band at
around 245 nm. The changes observed in the positive band are
reminiscent of DNA transformations seen in the presence of high
concentrations of electrolyte or by the reaction with a variety of
amines. For instance, at the level of DNA binding corresponding to
rb = 0.13, the reduction of the rotational
strength of the positive band above 260 nm in the CD spectrum of DNA in 10 mM NaClO4, pH 7.0 (Fig. 7A) was similar to
that obtained for underivatized DNA in ca. 6 M LiCl or at ca. 0.1 mol
of n-butylamine covalently fixed (via
CH2O)/mol of nucleotide (Chen et al., 1981
; Gray,
1996
). This transformation has been demonstrated to be roughly correlated with the reduction of the electrostatic repulsive
interactions in the DNA molecule. These interactions are reduced by
high concentrations of electrolytes in the solution or by simple amines
(retaining their positive charge) covalently attached to DNA. At pH 7, binding of Com1 to DNA could position two positively charged amino
groups in the dangling arms of this complex close to DNA phosphate
groups. Such salt bridges could result in an additional stabilization for DNA adducts of Com1 compared to those of Com2 (which contains only
one dangling arm with amino group) or cisplatin. This interpretation is
also corroborated by the observation that the marked loss in the
intensity of the positive band at around 280 nm due to the binding of
Com1 became considerably less pronounced if the sample of DNA modified
by Com1 at pH 7 for 48 h was transferred into the medium of pH 9 (not shown). The increase of pH could decrease the number of positively
charged amino groups of dangling arms due to their deprotonization. It
was verified by DPP that due to the increase of pH to 9, no platinum
compound dissociated from the DNA modified by Com1 at pH 7.
The changes induced in double-helical DNA by Com1 do not have the
character of extensive denaturational distortions. The cooperative character of the melting profile and the hyperchromic increase upon
melting are the same as for the unplatinated control, which contains
intact Watson-Crick hydrogen bonds (not shown). It has been shown (Chen
et al., 1981
; Gray, 1996
; Johnson, 1996
) that the conformation of DNA
in concentrated electrolyte solutions or when modified by some amines,
which gives rise to a CD spectrum with a markedly decreased rotational
strength above 260 nm, is a variant of the B structure. This variant
has a higher winding angle than that present in the nonmodified DNA in
more modest concentrations of electrolyte. Thus, we suggest that
double-helical DNA modified by Com1 adopts some features of the
conformation of DNA in concentrated electrolyte solutions or DNA to
which positively charged amines are covalently bound. Also importantly,
this conformational alteration is apparently unique for bifunctional
DNA binding of bifunctional bis(aminophosphine) compounds (no change
such as that seen for Com1 was observed for monofunctional Com2).
Unwinding Induced in DNA by Platinum Coordination.
The results
described above suggest that Com1 forms bifunctional adducts on DNA
although to a smaller extent than its bifunctional analog, cisplatin.
It has been shown that DNA adducts of cisplatin (and its direct
analogs) unwind DNA (e.g., Bellon et al., 1991
; Keck and Lippard, 1992
;
Huang et al., 1995
; Gelasco and Lippard, 1998
). CD spectra of DNA
modified by Com1 (Fig. 7A) suggest that this modification also results
in an overall overwinding of the DNA molecule as a whole if the
platinated DNA is dissolved in neutral media, whereas no changes in CD
spectra indicating overwinding occur if DNA is modified under identical
conditions by cisplatin or if the pH of the sample of DNA modified by
Com1 is adjusted to 9.
The unwinding induced by a random modification of DNA by various
platinum(II) complexes including cisplatin can be determined by
electrophoresis in native agarose gels by monitoring the degree of
supercoiling in plasmid DNA (Keck and Lippard, 1992
). A compound that
unwinds the DNA duplex reduces the number of supercoils in closed
circular, negatively supercoiled DNA. This decrease upon binding of
unwinding agents causes a decrease in the rate of migration through
agarose gels, which makes it possible that the unwinding can be
observed and quantified. We used this assay to determine the unwinding
induced in pSP73 plasmid by Com1 (Fig.
8). Figure 8A shows an electrophoresis
gel run at pH 9 of samples in which an increasing amount of Com1 was
bound to a mixture of nicked and supercoiled pSP73 DNA. The unwinding
angle is given by
= 18
/rb(c) where
is the superhelical density and rb(c) is the value of rb at which the supercoiled and nicked
forms comigrate (Keck and Lippard, 1992
). Under the present
experimental conditions,
was calculated to be
0.063 on the basis
of the data for cisplatin for which the rb(c) was
determined in this study and
= 13° was assumed (Keck and
Lippard, 1992
). The rb(c) for Com1 was determined to be 0.08 (Fig. 8A; this value represents the mean from three measurements and varied on average ±3% from this mean) so that the
unwinding angle for Com1 at pH 9 is 14 ± 1°. This value for the
average unwinding angle caused by DNA adducts of Com1 is very similar
to that found for DNA adducts of cisplatin and its direct analogs using
the same experimental approach (13°; Keck and Lippard, 1992
). Thus,
unwinding of DNA modified by Com1 and transferred into the medium of pH
9 is similar to that of DNA modified by cisplatin and its direct,
simple analogs.

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Fig. 8.
Unwinding of supercoiled pSP73 plasmid DNA by Com1.
DNA was modified in 10 mM NaClO4, pH 7, precipitated by
ethanol, dissolved in TBE buffer, pH 9.0 (A) or TAE buffer, pH 7.0 (B),
and analyzed by gel electrophoresis using the same buffer in which DNA
was dissolved. The top bands correspond to the form of nicked plasmid
and the bottom bands to the closed, negatively supercoiled plasmid. A,
lanes: 1 and 10, rb = 0; 2, rb = 0.008; 3, rb = 0.01; 4, rb = 0.02; 5, rb = 0.04; 6, rb = 0.06; 7, rb = 0.08; 8, rb = 0.09; 9, rb = 0.11. B, lanes: 1 and 14, rb = 0; 2, rb = 0.0008; 3, rb = 0.002; 4, rb = 0.004; 5, rb = 0.0064; 6, rb = 0.008; 7, rb = 0.02; 8, rb = 0.04; 9, rb = 0.064; 10, rb = 0.08; 11, rb = 0.2; 12, rb = 0.4; 13, rb = 0.64.
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CD spectra of DNA modified by Com1 and dissolved in neutral media (Fig.
7A) made it possible to suggest that at pH 7 DNA unwinding induced by
the binding of Com1 is more complicated than at pH 9. It is reasonable
to suggest that DNA adducts of Com1 unwind DNA similar to cisplatin or
Com1 at pH 9 [i.e., that they increase the number of bp per turn of
B-DNA by ca. 0.38 or 0.41 (these values correspond to the unwinding
angle of 13° found for cisplatin or 14° found for Com1]. In
addition, CD spectra of DNA modified by Com1 and dissolved in neutral
media (Fig. 7A) suggest that Com1, upon binding to DNA and
at pH 7, is also capable of overwinding DNA (i.e., to decrease the
number of bp per turn of DNA). It has been shown (Gray, 1996
; Johnson,
1996
) that the dramatic reduction of the intensity of DNA-positive CD
band at around 280 nm (Fig. 7, A and C) corresponds to a decrease in
the number of bp per turn in B-DNA by approximately 0.2, which
corresponds to the winding angle of ~7°. Thus, the resulting DNA
unwinding by Com1 at pH 7 could be the sum of the two antagonistic
effects. The rb(c) value for the sample of
plasmid pSP73 determined by means of gel electrophoresis at pH 7 was
0.2 (Fig. 8B) so that the total unwinding angle for Com1 at pH 7 was
only 6 ± 1°. A plausible explanation of this observation is
that in neutral media DNA unwinding caused by the adducts of Com1
(~14°) is partially compensated by overall overwinding of DNA
molecules (~7°) induced by the binding of Com1 and deduced from CD
spectra (Fig. 7, A and C).
No comigration of the relaxed and supercoiled forms of pSP73 DNA at pH
7 or 9 was reached even at a value of rb as high
as 0.2 if the sample of the plasmid was modified by monofunctional Com2
(not shown). This result indicates that Com2 induces a very small DNA
unwinding (
6°), which is consistent with a low DNA unwinding
efficiency of monofunctional adducts of several platinum(II) compounds
observed earlier (Keck and Lippard, 1992
;
aludová et al.,
1997b
; Balcarová et al., 1998
).
Interstrand Cross-Linking.
The amounts of ICLs formed by Com1
or Com2 in linear DNA were measured in pSP73 plasmid (2464 bp) that was
first linearized by EcoRI (EcoRI cuts only once
within pSP73 plasmid) and subsequently modified by Com1 or Com2 at
various rb. The samples were analyzed for the
ICLs by agarose gel electrophoresis under denaturing conditions.
An electrophoretic method for precise and quantitative determination of
interstrand cross-linking by platinum complexes in DNA was described
previously (Farrell et al., 1990
; Brabec and Leng, 1993
). Upon
electrophoresis under denaturing conditions, 3'-end labeled strands of
linearized pSP73 plasmid containing no ICLs migrated as a 2464-base
single strand, whereas the interstrand cross-linked strands migrated
more slowly as a higher molecular mass species. The bands corresponding
to more slowly migrating interstrand-cross-linked fragments were
observed if Com1 was used to modify linearized DNA at
rb as low as 7 × 10-4
(shown in Fig. 9A, lane 2). The intensity
of the more slowly migrating band increased with the growing level of
the modification. The radioactivity associated with the individual
bands in each lane was measured to obtain estimates of the fraction of
noncross-linked or cross-linked DNA under each condition. The frequency
of ICLs (the amount of ICLs per one molecule of the platinum complex
bound to DNA) was calculated using the Poisson distribution from the fraction of noncross-linked DNA in combination with the
rb values and the fragment size (Farrell et al.,
1990
). Com2 showed no interstrand cross-linking efficiency even at a
high rb such as 0.1 (not shown). On the other
hand, Com1 formed in DNA ICLs with a similar efficiency as cisplatin
(frequency of ICLs formed in DNA was small, 4-6%; Fig. 9B).

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Fig. 9.
The formation of ICLs by Com1 in the pSP73 plasmid
linearized by EcoRI. A, autoradiogram of a denaturing
1% agarose gel of DNA which was 3'-end labeled. The interstrand
cross-linked DNA appears as the top bands migrating on the gel more
slowly than the single-stranded DNA (contained in the bottom bands).
DNA was incubated with Com1 for 48 h at 37°C. rb
values: lane 1, 0; lane 2, 0.0007; lane 3, 0.0016; lane 4, 0.0032. B,
dependence on rb of the number of ICLs per adduct
(%ICL/Pt). The ratio of ICLs to total platinum bound was calculated as
described previously (Farrell et al., 1990 ; Brabec and Leng, 1993 );
%ICL/Pt was then calculated by multiplying this ratio by 100. Data
points measured in triplicate varied on average ±3% from their
mean.
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It has been demonstrated that the ICLs formed in DNA by some
nonmetal-based anticancer drugs are destroyed at alkaline pH and/or
elevated temperatures. It is, therefore, possible that the lability of
the ICLs of Com1 or Com2 in alkaline medium used in gel electrophoresis
under denaturing conditions (Fig. 9) could account for the negligible
frequency of DNA ICLs of Com2 or could result in underestimation of the
frequency of ICLs formed in DNA by Com1. Therefore, we have also used a
milder procedure that has allowed determination of alkali-unstable DNA
ICLs formed by several anthracyclines (Konopa, 1983
; Cullinane and
Phillips, 1994
). These techniques are based on the denaturation of
modified DNAs at significantly lower temperatures, in the presence of
either formamide or dimethyl sulfoxide and subsequent analysis in
native agarose gel. The milder DNA interstrand cross-linking assays
gave, however, frequencies of the ICLs of Com1 or Com2 that are similar to those determined by means of the agarose gel electrophoresis in an
alkaline medium. Thus, it appears unlikely that Com1 or Com2 form
alkali-unstable ICLs in DNA.
Immunochemical Analysis.
We prepared
Abcis, which recognizes two neighboring
purine residues of the same strand of DNA cis coordinated to
the platinum atom of
cis-[Pt(amine)2]2+
(Sundquist et al., 1987
; Vrána et al., 1992
). They do not
recognize monofunctional platinum adducts and the adducts of
transplatin and its analogs.
Using competitive enzyme-linked immunosorbent assay, the inhibition of
the binding of Abcis to their immunogens
(double-stranded CT DNA modified by cisplatin at
rb = 0.08 for 48 h) by double-stranded DNA
modified by Com1 or Com2 at various rb values in
the range of 0.005 to 0.1 was measured. It was found (not shown) that
double-stranded DNA modified by Com1 or Com2 did not inhibit the
binding of the Abcis.
Abcis exhibits an equally good specificity for
DNA modified by several analogs of cisplatin having varied nonleaving
amine groups (Sundquist et al., 1987
; Vrána et al., 1992
). The
observation that Abcis did not recognize DNA
modified by bifunctional Com1 is very likely related to distinct
conformational alterations induced in DNA by Com1 in comparison with
cisplatin.
B
Z Transition.
The effect of various platinum compounds on
the salt-induced B
Z transition in poly(dG-dC) has already been
described in several papers (for instance, Ushay et al., 1982
;
Pérez-Martin et al., 1993
;
aludová et al., 1997a
). In
the present work, DNA modifications by Com1 or Com2 are compared with
those by cisplatin or [PtCl(dien)]Cl, respectively. Cisplatin was
found to facilitate the B
Z transition, but the resulting Z form was
distorted and the transition cooperativity was considerably reduced.
[PtCl(dien)]Cl has been shown to stabilize the Z-form of DNA; for
[PtCl(dien)]Cl-treated poly(dG-dC), the Z conformation is observed at
a considerably lower salt concentration than for the nontreated
polymer, and the transition cooperativity is considerably reduced.
The effect of Com1 and Com2 binding on the B
Z transition in DNA was
investigated in poly(dG-dC) during salt-induced transition from the
right- to left-handed double helix. The transition was monitored by CD
spectroscopy at a series of NaCl concentrations between 0 and 4 M added
to the medium containing 10 mM NaClO4, 1 mM
phosphate buffer, pH 7.5 and 0.1 mM EDTA. All of our experiments were
done at rb of 0 or 0.1. The
rb value of 0.1 was chosen as a compromise
between a low value, which would have some relevance to the therapeutic
effects of the platinum compounds, and a larger value, which would
cause more pronounced changes in the spectra.
The CD spectra of nonplatinated poly(dG-dC) at various concentrations
of NaCl are shown in Fig. 10A. The
figure shows the characteristic inversion in the CD spectrum on going
from the right-handed B form to the left-handed Z form after addition
of at least 2.0 M NaCl, and is used as the standard with which to
compare the platinum-treated duplexes. The CD spectra at different NaCl
concentrations of poly(dG-dC) pretreated with either Com1 or Com2 in 10 mM sodium perchlorate (i.e., the polymer was treated when it was in the B conformation) are shown in Fig. 10, B and C, respectively.

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Fig. 10.
CD spectroscopy of poly(dG-dC) nonmodified (A) or
treated with Com1 (B) or Com2 (C) at rb = 0.1. The
polymer was modified when it was in B-form (in 10 mM
NaClO4) and was subsequently transferred into the media
containing 10 mM NaClO4 with 1 mM phosphate buffer, pH 7.5, plus 10 mM EDTA and various concentrations of NaCl. A, control,
nonmodified polymer; curves: 1, 0.19 M NaCl; 2, 1.53 M NaCl; 3, 2.17 M
NaCl; 4, 2.29 M NaCl; 5, 4.18 M NaCl. B, polymer modified by Com1;
curves: 1, no NaCl added; 2, 1.01 M NaCl; 3, 1.51 M NaCl; 4, 2.00 M
NaCl; 5, 3.14 M NaCl. C, polymer modified by Com2; curves: 1, no NaCl
added; 2, 0.97 M NaCl; 3, 1.44 M NaCl; 4, 1.89 M NaCl; 5, 2.82 NaCl. D,
plot of the molar ellipticity at 290 nm ( 290 nm) as a
function of Na+ concentration for poly(dG-dC) nonmodified
(×) or treated with Com1 ( ), Com2 ( ), and cisplatin at
rb = 0.1 ( ). Data points measured in duplicate
varied on average ±1% from their mean. Other details are described in
the text.
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A plot of the molar ellipticity at 290 nm as a function of the
concentration of NaCl added to 10 mM NaClO4 with
0.1 mM EDTA plus 1 mM phosphate buffer, pH 7.5 (Fig. 10D) can be used
to monitor the B
Z transition in poly(dG-dC) (
aludová et
al., 1997a
). From an examination of these plots presented in Fig. 10D
it is evident that the maximum variation in the ellipticity at 290 nm for the nonmodified (control) polymer and the polymers treated with
Com1 or Com2 occurs over a more or less narrow range in salt concentration. Thus, the transitions appear to be cooperative. The
efficiency of platinum complexes to inhibit or facilitate the B
Z
transition in DNA can be evaluated by means of the comparison of the
midpoints in salt-induced transitions of control and modified polymers.
The transition midpoint for control poly(dG-dC) occurs at 2.3 M whereas
the transition midpoints of poly(dG-dC) modified by Com1 or Com2 were
at ~1.6 M NaCl (Fig. 10D).
The results of the present work indicate that Com1 and Com2 facilitate
the B
Z transition in DNA, but the resulting Z forms are distorted.
Com1 distorts the Z-DNA more extensively than Com2. Com1 and Com2
affect B
Z transition differently, which implicates a different mode
of their binding to DNA. In addition, the different effects of Com1 or
Com2 on the B
Z transition in comparison with the effects of
cisplatin (Fig. 10D) and [PtCl(dien)]Cl are consistent with unique
DNA binding modes of the new aminophosphine platinum(II) complexes, as
potent drugs with antitumor efficacy different from that of cisplatin.
Conclusions.
In broad terms, we have demonstrated that the DNA
binding mode, and very likely also the mechanism of antitumor activity
of the new class of platinum(II) aminophosphine complexes, is different from that of cisplatin. This difference reflects the distinct nature of
nonleaving ligands. The replacement of amine ligands in
cis-dichloroplatinum(II) complexes by phosphine groups has been shown to influence considerably the selectivity for the adducts containing adenine and guanine residues and for monodentate and bidentate lesions. In addition, conformational alterations induced in
DNA by Com1 are different from those induced by cisplatin. The
different conformational changes and the increased bulk of the lesions
are consistent with a role of these factors in the processing of DNA
platinated by Com1. In particular, Com1 is more efficient than
cisplatin in blocking DNA synthesis. A specific role of aminophosphine
ligands in the modification of DNA by Com1 is also evident from the
observation that DNA platinated by Com1 is not recognized by the
antibodies elicited against DNA modified by cisplatin despite an
equally good specificity of these antibodies for DNA modified by
several analogs of cisplatin having varied nonleaving amine groups. A
further processing of platinum(II) adducts by cellular components has
been suggested to play an important role in the mechanism underlying
antitumor activity of platinum compounds. The different cellular
processing of DNA modified by cis-dichloroplatinum(II)
complexes containing on the one hand nonleaving amine groups and
aminophosphine ligands on the other might be relevant to the different
biological activity of these two classes of platinum compounds.
Structural studies of site-specific DNA adducts with aminophosphine
platinum(II) complexes should provide a basis for analyzing and
re-evaluating the structure-pharmacological activity relationships of
platinum compounds. Studies toward this end are in progress, from which
may ultimately arise a rational basis for design of a novel class of
platinum antitumor drugs.
This work was supported by Grants 305/99/0695, 301/98/P231,
307/97/P029, and 204/97/P028 from the Grant Agency of the Czech Republic, Grants A5004702 and A7004805 from the Grant Agency of the
Academy of Sciences of the Czech Republic, the Biotechnology and
Biological Sciences Research Council, and the Engineering and Physical
Sciences Research Council. V.B. is the recipient of an International
Research Scholar's award from the Howard Hughes Medical Institute.
This research is part of the European Cooperation in the Field of
Scientific and Technical Research program (Projects D8/0009/97
and D8/0012/97).